Vol. 1 No. 1 (2024): Volume 1, Issue 1, Year 2024
Articles

Evaluating the Reactive Sites, Topological Analysis of the Flavone and Isoflavone Compound – A DFT Study

Sivaranjani G
Department of Physics, Bannari Amman Institute of Technology, Sathyamangalam, Erode-638401, Tamil Nadu, India
Shilpa D
Department of Physics, Bannari Amman Institute of Technology, Sathyamangalam, Erode-638401, Tamil Nadu, India
Sadasivam K
Department of Physics, Bannari Amman Institute of Technology, Sathyamangalam, Erode-638401, Tamil Nadu, India

Published 2024-07-30

Keywords

  • Density functional theory DFT,
  • Quantitative electrostatic potential (QESP),
  • Atoms-in-molecules (AIM),
  • Electron localization function (ELF),
  • Local orbital locator (LOL)

How to Cite

G, S., D, S., & K, S. (2024). Evaluating the Reactive Sites, Topological Analysis of the Flavone and Isoflavone Compound – A DFT Study. Proceedings of the Asian Research Association, 1(1), 166-173. https://doi.org/10.54392/ara24119

Abstract

The rapid increase of free radicals (solitary pairs of the electron) population in the human system leads to the production of oxidative stress OS, it is the foremost initiator in simulating the infinite number of diseases in the human system, such as Parkinson’s disease, Alzheimer’s disease AD, amyotrophic lateral sclerosis ALS, multiple sclerosis, depression and memory loss as well as it disturbs the cellular arrangements like lipids, proteins, lipoproteins and deoxyribonucleic acid DNA. The generation of free radical population is terminated by donating an electron to it, these electrons are donated from the secondary plant metabolites which contains excellent antioxidant and antiradical property in nature. The theoretical investigation is plays a major role in identifying the radical scavenging ability as well as the reactive sites of the system, where an electron density is higher or lower. This is achieved from density functional theory DFT, one of the most efficient platform in analysing the reactive sites as well as the chemical bonding of the system, with the better accuracy among all the computational calculations. The DFT calculation is performed using Meta hybrid exchange functional (M06-2X) is employed to identify the interactive sites of the secondary plant metabolites orobol OR (3’, 4’, 5, 7 – tetrahydroxyisoflavone) and luteolin LU (3’, 4’, 5, 7 – tetrahydroxyflavone). The interacting sites of OR and LU are observed via quantitative electrostatic potential in which the electrophilic and nucleophilic potentials are analyzed. Electron donating and accepting propensity of the chosen secondary metabolites are identified, and interpreted with the help of electron localization function ELF and local orbital.

References

  1. C.S. Huang, Q. Wei, S.Y. Ma, L.B. Wei, A new okanin glycoside from the flowers of Coreopsis tinctoria Nutt. Biochemical Systematics and Ecology, 92, (2020) 104117. https://doi.org/10.1016/j.bse.2020.104117
  2. S.L. Badshah, S. Faisal, A. Muhammad, B.G. Poulson, A.H. Emwas, M. Jaremko, Antiviral activities of flavonoids. Biomedicine & pharmacotherapy, 140, (2021) 111596. https://doi.org/10.1016/j.biopha.2021.111596
  3. I. Górniak, R. Bartoszewski, J. Króliczewski, Comprehensive review of antimicrobial activities of plant flavonoids. Phytochemistry reviews, 18, (2019) 241-272. https://doi.org/10.1007/s11101-018-9591-z
  4. G.L. Hostetler, R.A. Ralston, S.J. Schwartz, Flavones: Food sources, bioavailability, metabolism, and bioactivity. Advances in Nutrition, 8(3), (2017) 423-435. https://doi.org/10.3945/an.116.012948
  5. L. Krizova, K. Dadakova, J. Kasparovska, T. Kasparovský, Isoflavones. Molecules, 24(6), (2019) 1076. https://doi.org/10.3390/molecules24061076
  6. M.H. Kim, Y.E. Jeon, S. Kang, J.Y. Lee, K.W. Lee, K.T. Kim, D.D. Kim, Lipid nanoparticles for enhancing the physicochemical stability and topical skin delivery of orobol. Pharmaceutics, 12(9), (2020) 845. https://doi.org/10.3390/pharmaceutics12090845
  7. H. Singh Tuli, P. Rath, A. Chauhan, K. Sak, D. Aggarwal, R. Choudhary, U. Sharma, K. Vashishth, S. Sharma, M. Kumar, V. Yadav, T. Singh, M.B. Yerer, S. Haque, Luteolin, a potent anticancer compound: from chemistry to cellular interactions and synergetic perspectives. Cancers, 14(21), (2022) 5373. https://doi.org/10.3390/cancers14215373
  8. M. Çetinkaya, Y. Baran, Therapeutic potential of luteolin on cancer. Vaccines, 11(3), (2023) 554. https://doi.org/10.3390/vaccines11030554
  9. K. Sadasivam, G. Sivaranjani, K. Vanitha, Theoretical investigation on interacting zones of certain flavones. Indian Journal of Chemistry (IJC), 63(2), (2024) 176-180. https://doi.org/10.56042/ijc.v63i2.5075
  10. M. Michalski, A.J. Gordon, S. Berski, Topological analysis of the electron localisation function (ELF) applied to the electronic structure of oxaziridine: the nature of NO bond. Structural Chemistry, 30, (2019) 2181-2189. https://doi.org/10.1007/s11224-019-01407-9
  11. L.R. Domingo, N. Acharjee, Unravelling the strain-promoted [3+ 2] cycloaddition reactions of phenyl azide with cycloalkynes from the molecular electron density theory perspective. New Journal of Chemistry, 44(32), (2020) 13633-13643. https://doi.org/10.1039/D0NJ02711A
  12. T. Lu, F. Chen, Multiwfn: A multifunctional wavefunction analyzer. Journal of computational chemistry, 33(5), (2012) 580-592. https://doi.org/10.1002/jcc.22885
  13. J. Lengyel, J. Rimarcik, A. Vaganek, E. Klein, On the radical scavenging activity of isoflavones: thermodynamics of O–H bond cleavage. Physical Chemistry Chemical Physics, 15(26), (2013) 10895-10903. https://doi.org/10.1039/C3CP00095H
  14. N. Muruganathan, A.R. Dhanapal, V. Baskar, P. Muthuramalingam, D. Selvaraj, H. Aara,. M.Z.S. Abdullah, I. Sivanesan, Recent updates on source, biosynthesis, and therapeutic potential of natural flavonoid luteolin: A review. Metabolites, 12(11), (2022) 1145. https://doi.org/10.3390/metabo12111145
  15. H.M. Ali, I.H. Ali, Structure-antioxidant activity relationships, QSAR, DFT calculation, and mechanisms of flavones and flavonols. Medicinal Chemistry Research, 28(12), (2019) 2262-2269. https://doi.org/10.1007/s00044-019-02452-z
  16. M. Michalski, A.J. Gordon and S. Berski, Topological analysis of the electron localisation function (ELF) applied to the electronic structure of oxaziridine: the nature of NO bond. Structural Chemistry, 30, (2019) 2181-2189. https://doi.org/10.1007/s11224-019-01407-9
  17. L.R. Domingo, N. Acharjee, J. Unveiling the high reactivity of strained dibenzocyclooctyne in [3 + 2] cycloaddition reactions with diazoalkanes through the molecular electron density theory, Journal of Physical Organic Chemistry, 33(11), (2020) e4100. https://doi.org/10.1002/poc.4100
  18. D. Shilpa, K. Sadasivam, M. Thirumoorthy, Topology analysis of six phytochemicals through ELF and LOL basins–A DFT study. Indian Journal of Chemistry (IJC), 62(11), (2023) 1171-1177. https://doi.org/10.56042/ijc.v62i11.2900